MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Shigella flexneri
19428wH2_1568
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 237
bases: 5,139,722 bps
CDS: 5,034
rRNA: 13
tRNA: 87
tmRNA: 1
Total number of protein coding genes annotated/found:
4,833
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5015|JADGKR010000026.1
MBF0742495.1
Genome Viewer
NA
AA
270/90
1-270
transposase
SEQF5015|JADGKR010000026.1
MBF0742496.1
Genome Viewer
NA
AA
669/223
956-288
DUF3313 domain-containing protein
SEQF5015|JADGKR010000026.1
MBF0742497.1
Genome Viewer
NA
AA
594/198
1852-1259
tellurite resistance methyltransferase TehB
SEQF5015|JADGKR010000026.1
MBF0742498.1
Genome Viewer
NA
AA
993/331
2841-1849
dicarboxylate transporter/tellurite-resistance protein TehA
SEQF5015|JADGKR010000026.1
MBF0742499.1
Genome Viewer
NA
AA
981/327
2965-3945
LbetaH domain-containing protein
SEQF5015|JADGKR010000026.1
MBF0742500.1
Genome Viewer
NA
AA
537/179
4476-3940
50S ribosomal protein L7/L12-serine acetyltransferase
SEQF5015|JADGKR010000026.1
MBF0742501.1
Genome Viewer
NA
AA
225/75
4763-4539
YdcH family protein
SEQF5015|JADGKR010000026.1
MBF0742502.1
Genome Viewer
NA
AA
1656/552
6558-4903
glucan biosynthesis protein OpgD
SEQF5015|JADGKR010000026.1
MBF0742503.1
Genome Viewer
NA
AA
1344/448
8126-6783
VOC family protein
SEQF5015|JADGKR010000026.1
MBF0742504.1
Genome Viewer
NA
AA
924/308
8343-9266
LysR family transcriptional regulator
SEQF5015|JADGKR010000026.1
MBF0742505.1
Genome Viewer
NA
AA
1641/547
10944-9304
methyl-accepting chemotaxis protein Trg
SEQF5015|JADGKR010000026.1
MBF0742506.1
Genome Viewer
NA
AA
150/50
11343-11492
type I toxin-antitoxin system toxin HokB
SEQF5015|JADGKR010000026.1
MBF0742507.1
Genome Viewer
NA
AA
174/58
11737-11564
hypothetical protein
SEQF5015|JADGKR010000026.1
MBF0742508.1
Genome Viewer
NA
AA
531/177
12512-11982
cytochrome b561
SEQF5015|JADGKR010000026.1
MBF0742509.1
Genome Viewer
NA
AA
1002/334
12701-13702
type I glyceraldehyde-3-phosphate dehydrogenase
SEQF5015|JADGKR010000026.1
MBF0742510.1
Genome Viewer
NA
AA
1440/480
15183-13744
aldehyde dehydrogenase
SEQF5015|JADGKR010000026.1
MBF0742511.1
Genome Viewer
NA
AA
801/267
16180-15380
YdcF family protein
SEQF5015|JADGKR010000026.1
MBF0742512.1
Genome Viewer
NA
AA
3945/1315
20396-16452
ATP-dependent RNA helicase HrpA
SEQF5015|JADGKR010000026.1
MBF0742513.1
Genome Viewer
NA
AA
606/202
20597-21202
FMN-dependent NADH-azoreductase
SEQF5015|JADGKR010000026.1
MBF0742514.1
Genome Viewer
NA
AA
1317/439
22569-21253
phosphatase PAP2/dual specificity phosphatase family protein
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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